Estudo conformacional do ritonavir no vácuo e em meio aquoso usando dinâmica molecular de Car-Parrinello
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Universidade Estadual de Goiás
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Ritonavir is an oral antiretroviral, used together with other medicines to treat
HIV / AIDS. Doses of this drug are used simultaneously with others protease
inhibitors and there are also reports of the use of ritonavir with other drugs to
prevent hepatitis C. They were reported different polymorphic forms of
ritonavir two years after the beginning of the market, when the capsules started
to show dissolution problems consequently to the lower bioavailability. X-ray
analysis showed the formation of a less soluble polymorph. Phenomena related
to solubility and bioavailability of drugs are closely linked to the chemical
structure of the same and with the interaction of molecules with solvents,
therefore, the main objective of this study is to evaluate the effects of aqueous
solvation on the geometric and electronic parameters of ritonavir using as tool
Molecular dynamics of Car-Parrinello. The cores of the electrons were treated
through the pseudopotential ultrasoft Vanderbilt, and the valence electrons were
represented by the set of plane waves basis functions. The power cut (Ecut) was
adopted 25 Ry and cutting power to the charge density (Ecutrho) was adopted
200 Ry. The temperatures of the studied systems were controlled using NoséHoover thermostat at 300 K. The simulation results show that hydration induces
to formation of several hydrogen bridges between ritonavir hydrophilic groups
and water molecules, there were also protonation of two nitrogens present in the
drug. The adiabatic separation remained constant during the simulation,
ensuring that there was no exchange of energy between the ionic and electronic
system.
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SILVA, A. M. Estudo conformacional do ritonavir no vácuo e em meio aquoso usando dinâmica molecular de Car-Parrinello. 2016. 97 f. Dissertação (Mestrado em Ciências Moleculares) - Câmpus Central - Sede: Anápolis - CET, Universidade Estadual de Goiás, Anápolis-GO.
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